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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015922627.1_cds_XP_016471397.1_63741
CDS Infomation

[gene=LOC107793533] [db_xref=GeneID:107793533] [protein=probable galacturonosyltransferase 14 isoform X2] [protein_id=XP_016471397.1] [location=complement(join(35705..35986,36648..36950,37988..38578,38842..38997,39160..39215,40988..41210))] [gbkey=CDS]
Sequence

ATGCAGCTGCACTTCTCACCTAGCATGAGAAGTATAACAATATCGAATAGTAATGGAGGA
TGTGTAGGTGGTGGTGATTTGATGAAGATCAAACTCGCAGCTCGCCAATTCTCTTATCGG
ACGCTCTTTCGCACCATATTAATCCTAGCTTTCTTGTTGCCTTTTGTCTTCATTCTTACT
GCTCTTGTTACTCTTGAAGGTGTCAACAAGTGCTCCTCAATTGATTGTTTAGGCAGACGA
TTGGGACCAAAGCTCCTTGGTCGATCTGATGGTTCAGGGAAGCTTGTTAAGGATTTTGTT
AAGATCCTCAATCAAGTGAACTCGGAGGAAGTGCCAGCTGGCTTGAAGCTCCCAGAGTCA
TATAGTCAACTGGTTTCTGAAATAAAAAACAACAAGTACAGCGCAAAAGAATTTGCTTTG
ATGCTGAAGGGAATGATGGAGAGATCTGAAAGGGAGATCAGAGAATCAAAATTTGCAGAG
TTGATGAATAAACACTTTGCTGCAAGTGCAGTTCCAAAAGGCATTCACTGTCTTTCACTG
CGGTTGACTGATGAATACTCGACCAATGCTCATGCACGCAAACAGTTGCCTTCACCAGAA
CTACTCCCTTTGCTTTCTGACAACTCATTGCACCATTTTGTACTGTCAACTGATAACATC
CTAGCTGCGTCAGTTGTCGTCAATTCTGGCGTGCAGTCATCTCTAAAGCCTGAAAAAATT
GTTTTCCACGTCATCACTGATAAGAAAACATATGCAGGCATGCATTCATGGTTTGCTCTG
AATCCTGTCTCTCCTGCTATTGTGGAAGTTAAAGGTGTTCATCAGTTTGACTGGTTGACA
AGAGAAAACGTTCCAGTGCTTGAAGTAGTTGAGAGCCATTATGGGATTCGGAAATACTAC
CATGGAAATCATGTTGCAGGTGCCAATCTCAGTGATATTACTCCGCGATCTTTTGCCTCA
AAATTGCAGGCTAGAAGTCCGAAATACATATCCTTGCTAAATCATCTCCGCATATATTTG
CCAGAGCTCTTCCCAAATCTTGACAAAGTGGTTTTCTTGGATGATGATGTCGTAATTCAA
CGTGACCTATCTCCCTTGTGGGAAATTGACCTGAATGGAAAGGTGAATGGAGCTGTTGAG
ACCTGTAAAGGTGAAGATAAGTGGGTGATGTCCAAGCGATTCAGAAATTACTTCAATTTT
TCTCATCATCTGATAGCAAAGAATTTGAACCCCGACGAGTGTGCATGGGCTTATGGGATG
AATATCTTTGACTTGCGTGCATGGAGAAAGACAAGTATAAGAGATACTTATCATACATGG
CTTAAAGAGAATCTGAAGTCAAACTTGACAATGTGGAAACTTGGAACGCTGCCTCCTGCT
TTGATTGCATTCAAGGGTCATGTTCATCCAATTGATCCCTCGTGGCACATGCTTGGCTTG
GGCTATCAGAATAAGACCAACATTGAGAATGTGAAGAAGGCTGCTGTAATTCATTACAAT
GGCCAATCCAAGCCTTGGCTAGACATAGGCTTTGAGCATCTCCGTCCTTTTTGGACCAAG
TATGTTAATTGCTCCAATGATTTTATTAGGAGTTGCCACATATTGGAGTAG

Peptide Sequence

PEP ID

XP_016471397.1
PEP Infomation

PREDICTED: probable galacturonosyltransferase 14 isoform X2 [Nicotiana tabacum]
Sequence

MQLHFSPSMRSITISNSNGGCVGGGDLMKIKLAARQFSYRTLFRTILILAFLLPFVFILT
ALVTLEGVNKCSSIDCLGRRLGPKLLGRSDGSGKLVKDFVKILNQVNSEEVPAGLKLPES
YSQLVSEIKNNKYSAKEFALMLKGMMERSEREIRESKFAELMNKHFAASAVPKGIHCLSL
RLTDEYSTNAHARKQLPSPELLPLLSDNSLHHFVLSTDNILAASVVVNSGVQSSLKPEKI
VFHVITDKKTYAGMHSWFALNPVSPAIVEVKGVHQFDWLTRENVPVLEVVESHYGIRKYY
HGNHVAGANLSDITPRSFASKLQARSPKYISLLNHLRIYLPELFPNLDKVVFLDDDVVIQ
RDLSPLWEIDLNGKVNGAVETCKGEDKWVMSKRFRNYFNFSHHLIAKNLNPDECAWAYGM
NIFDLRAWRKTSIRDTYHTWLKENLKSNLTMWKLGTLPPALIAFKGHVHPIDPSWHMLGL
GYQNKTNIENVKKAAVIHYNGQSKPWLDIGFEHLRPFWTKYVNCSNDFIRSCHILE

Transcript Sequence

Gene sequence data has not been registered.